STRINGSTRING
PBAL39_05428 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_05428" - Oxidoreductase in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_05428Oxidoreductase (254 aa)    
Predicted Functional Partners:
PBAL39_05423
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1 7-dioic acid hydratase (285 aa)
       
    0.949
PBAL39_05433
Altronate dehydratase (552 aa)
       
    0.835
PBAL39_05438
Uncharacterized protein (112 aa)
 
          0.816
PBAL39_05098
Mandelate racemase/muconate lactonizing enzyme-like protein (406 aa)
 
   
    0.787
PBAL39_05443
L-fucose permease (429 aa)
              0.782
PBAL39_23477
Oxidoreductase, short chain dehydrogenase/reductase family protein (229 aa)
   
          0.742
PBAL39_21755
Fumarylacetoacetate hydrolase family protein (332 aa)
       
    0.667
PBAL39_06776
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase, fumarylacetoacetate hydrolase family protein (203 aa)
       
    0.667
PBAL39_12885
Putative short-chain dehydrogenase (111 aa)
   
          0.615
PBAL39_18514
Short-chain dehydrogenase/reductase SDR (262 aa)
 
   
 
0.590
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
Server load: low (2%) [HD]