STRINGSTRING
PBAL39_05438 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_05438" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_05438Uncharacterized protein (112 aa)    
Predicted Functional Partners:
PBAL39_05443
L-fucose permease (429 aa)
 
     
  0.922
PBAL39_05433
Altronate dehydratase (552 aa)
 
          0.917
PBAL39_09521
Amidohydrolase 2 (276 aa)
 
          0.853
PBAL39_18514
Short-chain dehydrogenase/reductase SDR (262 aa)
 
          0.848
PBAL39_05428
Oxidoreductase (254 aa)
 
          0.816
PBAL39_05423
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1 7-dioic acid hydratase (285 aa)
 
          0.816
PBAL39_05448
Alpha-L-fucosidase, putative (713 aa)
 
          0.635
PBAL39_11607
Peptidase S13, D-Ala-D-Ala carboxypeptidase C (448 aa)
   
          0.519
PBAL39_05098
Mandelate racemase/muconate lactonizing enzyme-like protein (406 aa)
 
     
  0.501
PBAL39_06796
Multiple antibiotic resistance (MarC)-related protein (416 aa)
 
     
  0.443
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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