STRINGSTRING
PBAL39_05468 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_05468" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_05468Uncharacterized protein (171 aa)    
Predicted Functional Partners:
PBAL39_05458
Uncharacterized protein (186 aa)
 
          0.862
PBAL39_13747
Uncharacterized protein (155 aa)
   
          0.770
PBAL39_21605
Uncharacterized protein (111 aa)
   
          0.759
PBAL39_06006
Uncharacterized protein (89 aa)
   
          0.759
PBAL39_05463
Uncharacterized protein (258 aa)
              0.757
PBAL39_10221
Uncharacterized protein (117 aa)
   
          0.755
PBAL39_07850
Uncharacterized protein (159 aa)
   
          0.750
PBAL39_14179
Uncharacterized protein (347 aa)
   
          0.730
PBAL39_01847
Uncharacterized protein (353 aa)
   
          0.726
PBAL39_23953
Putative TonB-dependent receptor exported protein (788 aa)
   
          0.707
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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