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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
EDM37227.1 protein (Pedobacter sp. BAL39) - STRING interaction network
"EDM37227.1" - annotation not available in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM37227.1annotation not available (326 aa)    
Predicted Functional Partners:
EDM37225.1
annotation not available (431 aa)
 
          0.838
EDM37224.1
annotation not available (176 aa)
 
          0.795
EDM36452.1
annotation not available (237 aa)
   
          0.783
EDM36145.1
Uncharacterized protein; COG1011 Predicted hydrolase (HAD superfamily) (202 aa)
   
          0.779
EDM34515.1
annotation not available (250 aa)
   
          0.778
EDM37371.1
annotation not available (331 aa)
   
          0.778
EDM35050.1
annotation not available (669 aa)
   
          0.778
EDM35990.1
COG3637 Opacity protein and related surface antigens (279 aa)
   
          0.777
cysS
annotation not available (287 aa)
   
          0.777
EDM35995.1
Uncharacterized protein; COG0457 FOG- TPR repeat (174 aa)
   
          0.774
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter sp. BAL39
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