STRINGSTRING
PBAL39_05638 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_05638" - Uncharacterized protein in Pedobacter sp. BAL39
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_05638Uncharacterized protein (393 aa)    
Predicted Functional Partners:
PBAL39_06586
PorT-related protein (232 aa)
   
     
  0.778
PBAL39_12623
Uncharacterized protein (423 aa)
   
          0.778
PBAL39_11637
Two-component response regulator (517 aa)
   
          0.778
PBAL39_09476
Gliding motility-related protein TPR repeat-containing protein (929 aa)
   
          0.778
PBAL39_06286
Uncharacterized protein (304 aa)
   
          0.778
PBAL39_04823
Gliding motility-related protein (2393 aa)
   
          0.778
PBAL39_00952
Uncharacterized protein (801 aa)
   
          0.778
PBAL39_11802
Sensor histidine kinase (405 aa)
   
          0.777
ispF
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase ; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (159 aa)
              0.776
PBAL39_09496
Uncharacterized protein (512 aa)
   
          0.775
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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