STRINGSTRING
PBAL39_05658 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_05658" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_05658Uncharacterized protein (218 aa)    
Predicted Functional Partners:
PBAL39_05663
Ribosomal RNA small subunit methyltransferase E ; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit (234 aa)
              0.880
PBAL39_05678
Possible integral membrane protein (220 aa)
              0.845
ppa
Pyrophosphate phospho-hydrolase (184 aa)
              0.845
PBAL39_05668
Uncharacterized protein (438 aa)
              0.845
PBAL39_06831
Uncharacterized protein (306 aa)
 
          0.791
PBAL39_21395
Uncharacterized protein (681 aa)
   
          0.778
PBAL39_11587
Uncharacterized protein (1110 aa)
   
          0.778
PBAL39_09601
Uncharacterized protein (580 aa)
   
          0.778
PBAL39_08220
Uncharacterized protein (420 aa)
   
          0.778
PBAL39_08070
Uncharacterized protein (694 aa)
   
          0.778
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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