STRINGSTRING
PBAL39_05668 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_05668" - Uncharacterized protein in Pedobacter sp. BAL39
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_05668Uncharacterized protein (438 aa)    
Predicted Functional Partners:
PBAL39_02102
Glutamate synthase, large subunit (1182 aa)
   
   
  0.879
PBAL39_05663
Ribosomal RNA small subunit methyltransferase E ; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit (234 aa)
              0.871
ppa
Pyrophosphate phospho-hydrolase (184 aa)
   
        0.869
PBAL39_05678
Possible integral membrane protein (220 aa)
         
  0.861
PBAL39_05658
Uncharacterized protein (218 aa)
              0.845
nuoN
NDH-1 subunit N ; NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient (457 aa)
   
        0.713
PBAL39_04658
Methionine synthase (1219 aa)
       
    0.711
PBAL39_05688
NADH dehydrogenase I chain M (488 aa)
              0.703
PBAL39_05703
NADH dehydrogenase I chain J (165 aa)
 
          0.651
PBAL39_05693
NADH dehydrogenase I chain L (630 aa)
              0.650
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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