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EDM34095.1 protein (Pedobacter sp. BAL39) - STRING interaction network
"EDM34095.1" - COG0811 Biopolymer transport proteins in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
EDM34095.1COG0811 Biopolymer transport proteins (275 aa)    
Predicted Functional Partners:
EDM34094.1
Uncharacterized protein; COG0459 Chaperonin GroEL (HSP60 family) (204 aa)
 
  0.970
EDM34093.1
COG0848 Biopolymer transport protein (179 aa)
 
  0.970
EDM34092.1
Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins (273 aa)
 
  0.944
EDM34100.1
COG0848 Biopolymer transport protein (191 aa)
 
  0.911
EDM34090.1
COG0226 ABC-type phosphate transport system, periplasmic component (295 aa)
 
          0.873
EDM36129.1
Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins (281 aa)
 
  0.790
EDM34089.1
TPR repeat-containing protein; COG0457 FOG- TPR repeat (571 aa)
 
          0.756
ribBA
Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the N-terminal section; belongs to the DHBP synthase family (403 aa)
         
  0.630
EDM35752.1
COG0848 Biopolymer transport protein (133 aa)
   
  0.618
EDM37482.1
TonB; COG4219 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component (659 aa)
   
  0.599
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter sp. BAL39
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