STRINGSTRING
PBAL39_05783 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_05783" - Biopolymer transport protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_05783Biopolymer transport protein (275 aa)    
Predicted Functional Partners:
PBAL39_05778
Uncharacterized protein (204 aa)
 
          0.939
PBAL39_05773
Uncharacterized protein (179 aa)
 
          0.937
PBAL39_05758
Putative phosphate ABC transporter, phosphate-binding component (295 aa)
 
          0.866
PBAL39_05808
Uncharacterized protein (191 aa)
 
          0.849
PBAL39_05753
TPR repeat-containing protein (571 aa)
 
          0.820
PBAL39_05768
Protein TonB ; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins (273 aa)
 
          0.817
PBAL39_10306
Possible tonB-linked outer membrane receptor (763 aa)
 
 
  0.736
PBAL39_07550
Uncharacterized protein (808 aa)
 
 
  0.677
PBAL39_03334
Ferrichrome iron receptor (778 aa)
 
 
  0.670
lpxK
Lipid A 4’-kinase ; Transfers the gamma-phosphate of ATP to the 4’-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4’-bis-phosphate (lipid IVA) (335 aa)
 
      0.670
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
Server load: low (8%) [HD]