STRINGSTRING
PBAL39_05818 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_05818" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_05818Uncharacterized protein (137 aa)    
Predicted Functional Partners:
PBAL39_04668
Uncharacterized protein (151 aa)
   
          0.708
PBAL39_17564
CHU large protein candidate retaining b-glycosidase, glycoside hydrolase family 5 protein (1640 aa)
   
          0.705
PBAL39_03909
DoxX subfamily, putative (149 aa)
   
          0.658
PBAL39_07535
Probable periplasmic binding protein possible mechanosensitive ion channel component (778 aa)
   
          0.654
PBAL39_05823
Selenocysteine lyase (359 aa)
              0.642
PBAL39_19325
RNA polymerase, sigma-E factor heat shock and oxidative stress (152 aa)
   
          0.626
PBAL39_22240
Uncharacterized protein (470 aa)
   
          0.618
PBAL39_01882
Transcription antiterminator (173 aa)
   
          0.607
PBAL39_00937
Putative ABC transport system, ATP-binding protein (581 aa)
   
          0.587
PBAL39_20319
B-glycosidase, glycoside hydrolase family 16 protein (301 aa)
   
          0.585
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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