STRINGSTRING
PBAL39_05873 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_05873" - HIT family protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_05873HIT family protein (181 aa)    
Predicted Functional Partners:
PBAL39_05878
Uncharacterized protein (359 aa)
              0.801
PBAL39_21330
Uncharacterized protein (238 aa)
   
          0.645
PBAL39_05883
SelT/selW/selH selenoprotein (70 aa)
              0.624
PBAL39_11797
IG hypothetical 18565 (167 aa)
   
          0.548
PBAL39_22720
Uncharacterized protein (119 aa)
   
          0.509
PBAL39_21185
Putative endoribonuclease (176 aa)
   
          0.488
PBAL39_05888
Bifunctional methionine sulfoxide reductase B/A protein (87 aa)
              0.470
PBAL39_24143
Uncharacterized protein (120 aa)
   
          0.448
PBAL39_06676
Uncharacterized protein (534 aa)
   
          0.423
PBAL39_18794
Acetyltransferase (176 aa)
   
          0.411
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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