STRINGSTRING
PBAL39_05878 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_05878" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_05878Uncharacterized protein (359 aa)    
Predicted Functional Partners:
PBAL39_05873
HIT family protein (181 aa)
              0.801
PBAL39_05883
SelT/selW/selH selenoprotein (70 aa)
              0.666
PBAL39_25025
Putative multidrug resistance protein (354 aa)
   
 
  0.519
PBAL39_11747
Multidrug resistance protein A (347 aa)
   
 
  0.519
PBAL39_07515
Multidrug resistance protein A (349 aa)
   
 
  0.519
PBAL39_21060
Outer membrane protein (377 aa)
     
      0.502
PBAL39_12012
UPF0173 metal-dependent hydrolase PBAL39_12012 (225 aa)
     
      0.502
PBAL39_05888
Bifunctional methionine sulfoxide reductase B/A protein (87 aa)
              0.499
PBAL39_01732
Uncharacterized protein (149 aa)
   
          0.411
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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