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STRINGSTRING
EDM33914.1 protein (Pedobacter sp. BAL39) - STRING interaction network
"EDM33914.1" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM33914.1Uncharacterized protein (397 aa)    
Predicted Functional Partners:
EDM36082.1
Uncharacterized protein (326 aa)
   
  0.972
EDM35962.1
Uncharacterized protein (325 aa)
   
  0.962
EDM33913.1
annotation not available (68 aa)
              0.845
EDM33915.1
COG1960 Acyl-CoA dehydrogenases (453 aa)
              0.761
EDM33912.1
annotation not available (82 aa)
              0.727
EDM37409.1
Molybdopterin oxidoreductase, iron-sulfur binding subunit; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing (1035 aa)
     
 
    0.606
EDM36081.1
Uncharacterized protein; COG1174 ABC-type proline/glycine betaine transport systems, permease component (534 aa)
 
        0.456
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter sp. BAL39
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