STRINGSTRING
PBAL39_06051 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_06051" - Putative TonB-dependent outer membrane receptor protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_06051Putative TonB-dependent outer membrane receptor protein (1019 aa)    
Predicted Functional Partners:
PBAL39_06046
Uncharacterized protein (436 aa)
              0.834
PBAL39_24710
Uncharacterized protein (351 aa)
   
          0.776
PBAL39_06056
Putative anti-sigma factor (341 aa)
 
          0.647
PBAL39_09021
Uncharacterized protein (469 aa)
   
          0.623
PBAL39_07080
Uncharacterized protein (452 aa)
   
          0.617
PBAL39_11717
Dipeptidyl-peptidase (795 aa)
   
          0.492
PBAL39_04773
Possible aminopeptidase (524 aa)
   
          0.456
PBAL39_01407
Uncharacterized protein (506 aa)
   
          0.448
PBAL39_06061
Putative ECF-type RNA polymerase (198 aa)
              0.444
PBAL39_25230
CHU large protein uncharacterized (576 aa)
   
          0.439
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
Server load: low (8%) [HD]