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rpsA protein (Pedobacter sp. BAL39) - STRING interaction network
"rpsA" - 30S ribosomal protein S1 in Pedobacter sp. BAL39
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
rpsA30S ribosomal protein S1 (644 aa)    
Predicted Functional Partners:
rplJ
50S ribosomal protein L10 ; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors (172 aa)
     
  0.987
tsf
Elongation factor Ts ; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome (279 aa)
   
 
  0.980
ispH
4-hydroxy-3-methylbut-2-enyl diphosphate reductase (258 aa)
 
    0.975
cmk
Cytidine monophosphate kinase (225 aa)
 
 
  0.954
rpoB
Transcriptase subunit beta ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1267 aa)
   
 
  0.951
tuf
Elongation factor Tu ; This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (395 aa)
   
 
  0.948
rpoC
Transcriptase subunit beta’ ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1428 aa)
   
 
  0.947
rpsB
30S ribosomal protein S2 (276 aa)
 
  0.945
PBAL39_08450
30S ribosomal protein S10 ; Involved in the binding of tRNA to the ribosomes (101 aa)
   
  0.932
truB
tRNA-uridine isomerase ; Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs (258 aa)
   
 
  0.913
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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