STRINGSTRING
PBAL39_06276 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_06276" - DNA-directed RNA polymerase subunit omega in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_06276DNA-directed RNA polymerase subunit omega ; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta’ subunit thereby facilitating its interaction with the beta and alpha subunits (108 aa)    
Predicted Functional Partners:
PBAL39_06271
Conserved hypothetical lipoprotein (309 aa)
 
          0.971
PBAL39_06286
Uncharacterized protein (304 aa)
 
          0.868
PBAL39_23908
Signal peptidase I (400 aa)
 
          0.774
PBAL39_12563
Uncharacterized protein (153 aa)
   
          0.773
PBAL39_08766
TPR domain protein (223 aa)
   
          0.772
PBAL39_06281
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase (400 aa)
              0.772
PBAL39_19305
Uncharacterized protein (999 aa)
   
          0.769
PBAL39_20640
Uncharacterized protein (426 aa)
   
          0.768
PBAL39_08574
Uncharacterized protein (1009 aa)
   
          0.768
PBAL39_02207
Uncharacterized protein (237 aa)
   
          0.764
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
Server load: low (8%) [HD]