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PBAL39_06301 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_06301" - Recombination protein N in Pedobacter sp. BAL39
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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PBAL39_06301Recombination protein N ; May be involved in recombinational repair of damaged DNA (552 aa)    
Predicted Functional Partners:
PBAL39_06306
Uncharacterized protein (409 aa)
              0.859
recR
Recombination protein RecR ; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO (205 aa)
 
     
  0.780
recF
DNA replication and repair protein RecF ; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP (367 aa)
   
 
 
  0.707
mfd
Transcription-repair-coupling factor ; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site (1114 aa)
 
 
  0.678
recA
Recombinase A ; Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage (338 aa)
     
 
  0.669
PBAL39_06281
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase (400 aa)
 
          0.664
ruvA
Holliday junction ATP-dependent DNA helicase RuvA ; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB (194 aa)
 
   
  0.646
PBAL39_06311
Uncharacterized protein (358 aa)
         
  0.636
PBAL39_06286
Uncharacterized protein (304 aa)
              0.596
PBAL39_02227
Tyrosine recombinase XerC (292 aa)
 
 
  0.585
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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