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PBAL39_06351 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_06351" - ROK family member transcriptional repressor in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_06351ROK family member transcriptional repressor (290 aa)    
Predicted Functional Partners:
PBAL39_22847
ROK family member transcriptional repressor (601 aa)
          0.909
PBAL39_25250
Polyphosphate glucokinase (249 aa)
   
   
    0.735
PBAL39_23903
ROK (373 aa)
   
   
    0.653
PBAL39_19659
Putative xylose repressor (406 aa)
   
   
    0.631
PBAL39_19789
Short chain dehydrogenase (271 aa)
   
   
    0.602
PBAL39_18249
LacX protein, putative (290 aa)
   
   
    0.564
PBAL39_22852
Transcriptional regulator (242 aa)
 
          0.512
PBAL39_19564
Uncharacterized protein (125 aa)
   
          0.487
PBAL39_06356
Uncharacterized protein (77 aa)
              0.465
PBAL39_22800
Putative alpha-1,2-mannosidase (690 aa)
   
          0.433
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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