STRINGSTRING
PBAL39_06381 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_06381" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_06381Uncharacterized protein (342 aa)    
Predicted Functional Partners:
PBAL39_06386
Ammonium transporter (458 aa)
              0.752
PBAL39_06376
Uncharacterized protein (195 aa)
              0.646
PBAL39_09631
Uncharacterized protein (86 aa)
   
          0.630
PBAL39_06206
Probable integral outer membrane protein (566 aa)
   
          0.622
PBAL39_13487
Transcriptional regulator (149 aa)
   
          0.621
PBAL39_08225
Uncharacterized protein (669 aa)
   
          0.620
PBAL39_06226
Uncharacterized protein (271 aa)
   
          0.619
PBAL39_20815
Sulfite reductase (NADPH) (698 aa)
   
          0.600
PBAL39_17674
Uncharacterized protein (235 aa)
   
          0.592
PBAL39_21915
TonB-dependent receptor domain protein (967 aa)
   
          0.572
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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