STRINGSTRING
PBAL39_06511 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_06511" - Fucose permease in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_06511Fucose permease (535 aa)    
Predicted Functional Partners:
PBAL39_18514
Short-chain dehydrogenase/reductase SDR (262 aa)
   
   
  0.705
PBAL39_10776
Uncharacterized protein (138 aa)
   
   
  0.702
PBAL39_06506
Cytidine/deoxycytidylate deaminase (DCMP deaminase) (150 aa)
              0.659
guaA
Glutamine amidotransferase ; Catalyzes the synthesis of GMP from XMP (509 aa)
              0.653
PBAL39_06496
Uncharacterized protein (399 aa)
              0.653
PBAL39_06491
Fmu (Sun) domain protein (388 aa)
              0.653
PBAL39_05433
Altronate dehydratase (552 aa)
   
        0.598
PBAL39_09521
Amidohydrolase 2 (276 aa)
   
        0.489
PBAL39_06516
Lysine exporter protein (LYSE/YGGA) (207 aa)
              0.482
PBAL39_06521
Uncharacterized protein (40 aa)
              0.458
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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