STRINGSTRING
PBAL39_06516 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_06516" - Lysine exporter protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_06516Lysine exporter protein (LYSE/YGGA) (207 aa)    
Predicted Functional Partners:
PBAL39_06521
Uncharacterized protein (40 aa)
              0.810
PBAL39_10526
Uncharacterized protein (475 aa)
   
          0.767
PBAL39_06496
Uncharacterized protein (399 aa)
 
          0.714
PBAL39_25285
CHU large protein uncharacterized (251 aa)
   
          0.708
PBAL39_09871
Uncharacterized protein (387 aa)
   
          0.706
PBAL39_24068
Uncharacterized protein (1473 aa)
   
          0.701
PBAL39_25425
Membrane spanning protein, required for outer membrane integrity (526 aa)
   
          0.698
PBAL39_13300
Uncharacterized protein (953 aa)
   
          0.690
PBAL39_03739
Uncharacterized protein (816 aa)
   
          0.683
PBAL39_06556
Uncharacterized protein (274 aa)
   
          0.682
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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