STRINGSTRING
PBAL39_06536 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_06536" - Putative outer membrane protein in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_06536Putative outer membrane protein (185 aa)    
Predicted Functional Partners:
PBAL39_06546
Outer membrane protein probable bacterial surface antigen (829 aa)
 
          0.933
PBAL39_06541
Putative cationic 19 kDa outer membrane protein (176 aa)
 
       
0.824
PBAL39_08851
Uncharacterized protein (802 aa)
   
          0.763
PBAL39_08766
TPR domain protein (223 aa)
   
          0.759
PBAL39_12648
Outer membrane protein (808 aa)
   
          0.755
PBAL39_11562
Uncharacterized protein (542 aa)
   
          0.752
PBAL39_01022
Uncharacterized protein (893 aa)
   
          0.745
PBAL39_05513
Uncharacterized protein (818 aa)
   
          0.741
PBAL39_18324
Uncharacterized protein (73 aa)
   
          0.737
murI
Glutamate racemase ; Provides the (R)-glutamate required for cell wall biosynthesis (276 aa)
              0.737
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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