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EDM35816.1 protein (Pedobacter sp. BAL39) - STRING interaction network
"EDM35816.1" - Putative cationic 19 kDa outer membrane protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM35816.1Putative cationic 19 kDa outer membrane protein; COG2825 Outer membrane protein (176 aa)    
Predicted Functional Partners:
EDM35817.1
COG4775 Outer membrane protein/protective antigen OMA87 (829 aa)
 
 
  0.965
EDM35815.1
COG2825 Outer membrane protein (185 aa)
 
     
0.816
EDM38153.1
annotation not available (893 aa)
   
     
  0.768
EDM35762.1
Conserved hypothetical lipoprotein; COG4105 DNA uptake lipoprotein (309 aa)
 
   
  0.759
EDM33952.1
annotation not available (1009 aa)
   
          0.755
EDM37231.1
Uncharacterized protein; COG0477 Permeases of the major facilitator superfamily (818 aa)
   
          0.754
EDM34951.1
COG4485 Predicted membrane protein (832 aa)
   
          0.753
EDM35819.1
annotation not available (274 aa)
 
 
  0.733
EDM34470.1
Uncharacterized protein; COG2223 Nitrate/nitrite transporter (999 aa)
   
          0.723
murI
Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis (276 aa)
 
          0.697
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter sp. BAL39
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