STRINGSTRING
PBAL39_06546 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_06546" - Outer membrane protein probable bacterial surface antigen in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_06546Outer membrane protein probable bacterial surface antigen (829 aa)    
Predicted Functional Partners:
PBAL39_06541
Putative cationic 19 kDa outer membrane protein (176 aa)
 
          0.965
PBAL39_06536
Putative outer membrane protein (185 aa)
 
          0.933
lpxC
UDP-3-O-[R-3-hydroxymyristoyl]-N-acetylglucosamine deacetylase ; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis (469 aa)
 
 
  0.877
PBAL39_12473
ABC transporter, permease (406 aa)
 
        0.850
PBAL39_08871
Peptidylprolyl isomerase (454 aa)
 
 
  0.840
PBAL39_24420
Putative lipoprotein releasing system transmembrane protein (410 aa)
 
        0.818
PBAL39_21350
Zinc metalloprotease (441 aa)
 
   
  0.817
PBAL39_13617
Uncharacterized protein (367 aa)
 
        0.805
PBAL39_23908
Signal peptidase I (400 aa)
 
 
  0.801
yidC
Membrane protein YidC ; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins (598 aa)
   
 
  0.791
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
Server load: low (2%) [HD]