STRINGSTRING
engB protein (Pedobacter sp. BAL39) - STRING interaction network
"engB" - Probable GTP-binding protein EngB in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
engBProbable GTP-binding protein EngB ; Necessary for normal cell division and for the maintenance of normal septation (209 aa)    
Predicted Functional Partners:
PBAL39_04628
GTPase Era ; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism (292 aa)
 
   
  0.692
menG
Demethylmenaquinone methyltransferase ; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) (243 aa)
   
        0.681
der
GTP-binding protein EngA ; GTPase that plays an essential role in the late steps of ribosome biogenesis (433 aa)
 
   
  0.635
rnr
Ribonuclease R ; 3’-5’ exoribonuclease that releases 5’-nucleoside monophosphates and is involved in maturation of structured RNAs (709 aa)
   
   
  0.587
ftsY
Signal recognition particle receptor FtsY ; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) (320 aa)
   
 
  0.543
rlmH
rRNA (pseudouridine-N3-)-methyltransferase RlmH ; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA (157 aa)
 
   
  0.523
PBAL39_06571
Hydrolase, alpha/beta fold superfamily protein (254 aa)
   
        0.517
PBAL39_06231
Folylpolyglutamate synthase (412 aa)
 
   
  0.509
dapD
2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase (271 aa)
 
          0.505
PBAL39_10626
Uridylate kinase ; Catalyzes the reversible phosphorylation of UMP to UDP (235 aa)
 
   
  0.498
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
Server load: low (4%) [HD]