STRINGSTRING
PBAL39_06611 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_06611" - Oligoendopeptidase F in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_06611Oligoendopeptidase F (571 aa)    
Predicted Functional Partners:
PBAL39_06606
4-hydroxybenzoate polyprenyltransferase-related protein (244 aa)
              0.862
PBAL39_06616
Amino acid transport protein (651 aa)
         
  0.672
PBAL39_06601
Uncharacterized protein (49 aa)
              0.665
PBAL39_21645
Uncharacterized protein (271 aa)
   
          0.602
PBAL39_09501
Gliding motility-related protein (270 aa)
   
          0.510
PBAL39_05813
Uncharacterized protein (115 aa)
   
          0.447
PBAL39_13552
Protein-export membrane protein SecD/SecF ; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA (987 aa)
           
  0.429
PBAL39_09601
Uncharacterized protein (580 aa)
   
          0.405
PBAL39_04333
Uncharacterized protein (350 aa)
   
          0.404
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
Server load: low (8%) [HD]