STRINGSTRING
PBAL39_06626 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_06626" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_06626Uncharacterized protein (149 aa)    
Predicted Functional Partners:
PBAL39_05578
Tricorn protease homolog ; Degrades oligopeptides (1073 aa)
   
          0.745
PBAL39_20990
Uncharacterized protein (158 aa)
   
          0.730
PBAL39_06621
Uncharacterized protein (228 aa)
              0.718
PBAL39_02820
Putative HlyD-family transporter (435 aa)
   
          0.714
PBAL39_16741
Uncharacterized protein (437 aa)
   
          0.671
PBAL39_14879
RNA polymerase, sigma-24 subunit, ECF subfamily protein (145 aa)
   
          0.670
PBAL39_08796
Uncharacterized protein (292 aa)
   
          0.621
PBAL39_23137
Uncharacterized protein (239 aa)
   
          0.619
PBAL39_13025
Uncharacterized protein (261 aa)
   
          0.616
PBAL39_25350
Uncharacterized protein (191 aa)
   
          0.590
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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