STRINGSTRING
PBAL39_06896 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_06896" - Uncharacterized protein in Pedobacter sp. BAL39
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_06896Uncharacterized protein (188 aa)    
Predicted Functional Partners:
PBAL39_06901
tRNA nucleotidyltransferase (468 aa)
   
        0.844
PBAL39_06906
Uncharacterized protein (218 aa)
 
          0.819
PBAL39_10900
Methionyl-tRNA synthetase ; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation (716 aa)
 
   
  0.780
PBAL39_13642
Putative DNA processing Smf-like protein (365 aa)
 
   
  0.768
dapD
2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase (271 aa)
              0.767
tsaD
tRNA threonylcarbamoyladenosine biosynthesis protein TsaD ; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction (333 aa)
 
 
  0.766
PBAL39_24830
Putative glycoprotease family exported protein (227 aa)
 
 
  0.729
PBAL39_06891
Mannosyltransferase (372 aa)
   
        0.729
PBAL39_06911
Isopentenyl-diphosphate-tRNA isopentenyltransferase ; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) (307 aa)
 
     
  0.718
PBAL39_08891
Cysteinyl-tRNA synthetase (486 aa)
 
        0.670
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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