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PBAL39_06901 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_06901" - tRNA nucleotidyltransferase in Pedobacter sp. BAL39
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
PBAL39_06901tRNA nucleotidyltransferase (468 aa)    
Predicted Functional Partners:
PBAL39_10541
Ribonuclease G (503 aa)
 
  0.906
rnz
tRNase Z ; Zinc phosphodiesterase, which displays some tRNA 3’- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3’-trailer from precursor tRNA (303 aa)
   
 
  0.859
PBAL39_06896
Uncharacterized protein (188 aa)
   
        0.844
pnp
Polynucleotide phosphorylase ; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3’- to 5’-direction (715 aa)
     
  0.819
rnr
Ribonuclease R ; 3’-5’ exoribonuclease that releases 5’-nucleoside monophosphates and is involved in maturation of structured RNAs (709 aa)
   
  0.803
PBAL39_06906
Uncharacterized protein (218 aa)
              0.756
PBAL39_06911
Isopentenyl-diphosphate-tRNA isopentenyltransferase ; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) (307 aa)
   
   
  0.723
PBAL39_01022
Uncharacterized protein (893 aa)
   
          0.717
dapD
2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase (271 aa)
              0.714
PBAL39_06546
Outer membrane protein probable bacterial surface antigen (829 aa)
 
        0.706
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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