STRINGSTRING
PBAL39_06906 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_06906" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_06906Uncharacterized protein (218 aa)    
Predicted Functional Partners:
PBAL39_06911
Isopentenyl-diphosphate-tRNA isopentenyltransferase ; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) (307 aa)
              0.899
PBAL39_06896
Uncharacterized protein (188 aa)
 
          0.819
PBAL39_06201
Uncharacterized protein (1005 aa)
   
          0.778
PBAL39_06226
Uncharacterized protein (271 aa)
   
          0.776
PBAL39_06221
Possible biopolymer transport protein (133 aa)
   
          0.767
PBAL39_24068
Uncharacterized protein (1473 aa)
   
          0.766
PBAL39_06901
tRNA nucleotidyltransferase (468 aa)
              0.756
PBAL39_24083
Uncharacterized protein (97 aa)
   
          0.753
PBAL39_06496
Uncharacterized protein (399 aa)
   
          0.748
PBAL39_08851
Uncharacterized protein (802 aa)
   
          0.745
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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