STRINGSTRING
PBAL39_07001 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_07001" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_07001Uncharacterized protein (306 aa)    
Predicted Functional Partners:
apt
Adenine phosphoribosyltransferase ; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis (207 aa)
         
  0.871
PBAL39_23862
Uncharacterized protein (53 aa)
   
          0.688
PBAL39_20640
Uncharacterized protein (426 aa)
 
          0.660
PBAL39_07006
Putative hemolysin (583 aa)
              0.644
PBAL39_14489
Uncharacterized protein (130 aa)
   
          0.634
PBAL39_06866
Uncharacterized protein (197 aa)
   
          0.617
PBAL39_06276
DNA-directed RNA polymerase subunit omega ; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta’ subunit thereby facilitating its interaction with the beta and alpha subunits (108 aa)
   
          0.606
PBAL39_08210
Uncharacterized protein (179 aa)
   
          0.577
PBAL39_19275
Putative lipoprotein (167 aa)
   
          0.576
PBAL39_08574
Uncharacterized protein (1009 aa)
   
          0.568
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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