STRINGSTRING
PBAL39_07090 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_07090" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_07090Uncharacterized protein (169 aa)    
Predicted Functional Partners:
PBAL39_14549
Uncharacterized protein (105 aa)
   
        0.591
rny
Ribonuclease Y ; Endoribonuclease that initiates mRNA decay (520 aa)
              0.586
PBAL39_07085
TonB-dependent receptor (952 aa)
              0.574
PBAL39_09536
Oxidoreductase (261 aa)
 
        0.457
PBAL39_09101
Uncharacterized protein (293 aa)
   
          0.420
PBAL39_07080
Uncharacterized protein (452 aa)
              0.415
PBAL39_02157
Uncharacterized protein (161 aa)
   
          0.412
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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