STRINGSTRING
PBAL39_07120 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_07120" - DNA repair protein in Pedobacter sp. BAL39
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_07120DNA repair protein (232 aa)    
Predicted Functional Partners:
PBAL39_07115
Phenylalanyl-tRNA synthetase beta subunit (799 aa)
     
 
  0.776
rpsT
30S ribosomal protein S20 ; Binds directly to 16S ribosomal RNA (84 aa)
              0.738
mutL
DNA mismatch repair protein MutL ; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex (615 aa)
 
   
  0.671
mutS
DNA mismatch repair protein MutS ; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity (858 aa)
 
     
  0.580
PBAL39_12007
DNA polymerase I (937 aa)
     
 
  0.544
PBAL39_07110
Phenylalanyl-tRNA synthetase beta subunit (96 aa)
              0.516
maf
Maf-like protein maf (189 aa)
     
 
  0.495
PBAL39_07105
Cell division protein ZapA ; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division (96 aa)
              0.460
PBAL39_24615
Formamidopyrimidine-DNA glycosylase (259 aa)
     
 
  0.458
PBAL39_23852
50S ribosomal protein L28 (67 aa)
   
   
  0.447
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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