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PBAL39_07155 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_07155" - Cell shape protein MreC in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_07155Cell shape protein MreC ; Involved in formation and maintenance of cell shape (278 aa)    
Predicted Functional Partners:
PBAL39_07150
Rod shape-determining protein (340 aa)
 
 
  0.973
PBAL39_07165
Penicillin-binding protein 2 (648 aa)
 
   
  0.967
PBAL39_07170
Rod shape-determining protein (419 aa)
 
 
  0.961
PBAL39_07160
Putative transmembrane protein (171 aa)
 
          0.900
PBAL39_22010
Cell division protein, penicillin-binding protein (700 aa)
 
   
  0.647
PBAL39_07145
Bifunctional purine biosynthesis protein PurH (508 aa)
              0.610
PBAL39_00897
Putative aminodeoxychorismate lyase (351 aa)
 
      0.597
PBAL39_21990
Cell division protein (388 aa)
 
 
  0.583
PBAL39_00902
Uncharacterized protein (256 aa)
   
          0.543
PBAL39_09866
Uncharacterized protein (166 aa)
   
          0.499
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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