STRINGSTRING
PBAL39_07160 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_07160" - Putative transmembrane protein in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_07160Putative transmembrane protein (171 aa)    
Predicted Functional Partners:
PBAL39_07165
Penicillin-binding protein 2 (648 aa)
 
          0.918
PBAL39_07170
Rod shape-determining protein (419 aa)
 
          0.913
PBAL39_07155
Cell shape protein MreC ; Involved in formation and maintenance of cell shape (278 aa)
 
          0.900
PBAL39_06866
Uncharacterized protein (197 aa)
   
          0.737
PBAL39_05218
Uncharacterized protein (540 aa)
   
          0.707
PBAL39_07150
Rod shape-determining protein (340 aa)
              0.701
PBAL39_09501
Gliding motility-related protein (270 aa)
   
          0.689
PBAL39_09791
Preprotein translocase ATPase subunit (165 aa)
   
          0.680
PBAL39_21975
Cell division protein FtsQ (362 aa)
   
          0.678
PBAL39_06496
Uncharacterized protein (399 aa)
   
          0.677
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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