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PBAL39_07210 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_07210" - RNA polymerase sigma factor (Possible RNA polymerase sigma-24 factor) in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_07210RNA polymerase sigma factor (Possible RNA polymerase sigma-24 factor) (194 aa)    
Predicted Functional Partners:
PBAL39_07205
Putative anti-sigma factor (328 aa)
 
          0.619
PBAL39_07880
RNA polymerase ECF-type sigma factor (183 aa)
   
          0.602
PBAL39_25615
RNA polymerase ECF-type sigma factor (179 aa)
   
          0.568
PBAL39_23692
Putative RNA polymerase ECF-type sigma factor (194 aa)
   
          0.524
PBAL39_14144
RNA polymerase ECF-type sigma factor (208 aa)
   
          0.492
PBAL39_07230
Putative anti-sigma factor (325 aa)
 
          0.477
PBAL39_17279
Putative RNA polymerase sigma factor (188 aa)
   
          0.449
PBAL39_07215
Putative alpha-1,2-mannosidase (694 aa)
              0.422
PBAL39_16786
Putative anti-sigma factor (338 aa)
   
          0.418
PBAL39_03364
Putative ECF-type RNA polymerase sigma factor (196 aa)
   
          0.402
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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