STRINGSTRING
PBAL39_07270 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_07270" - Putative transcriptional regulator in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_07270Putative transcriptional regulator (343 aa)    
Predicted Functional Partners:
PBAL39_07250
Carbohydrate kinase, FGGY (451 aa)
 
          0.846
PBAL39_07260
Short chain dehydrogenase (706 aa)
 
          0.708
PBAL39_07275
Putative amino transferase (231 aa)
              0.684
PBAL39_07255
Putative sugar isomerase protein (433 aa)
 
          0.655
PBAL39_07265
RhaT l-rhamnose-proton symport 2 (359 aa)
 
          0.641
PBAL39_07280
Uncharacterized protein (185 aa)
 
          0.610
PBAL39_19275
Putative lipoprotein (167 aa)
   
          0.582
PBAL39_20850
Uncharacterized protein (95 aa)
   
          0.572
PBAL39_15159
Uncharacterized protein (402 aa)
   
          0.568
PBAL39_01262
Uncharacterized protein (578 aa)
   
          0.565
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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