STRINGSTRING
PBAL39_07350 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_07350" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_07350Uncharacterized protein (142 aa)    
Predicted Functional Partners:
PBAL39_16766
Uncharacterized protein (232 aa)
 
        0.787
PBAL39_07355
Beta-lactamase (364 aa)
              0.657
PBAL39_07345
Uncharacterized protein (79 aa)
              0.627
PBAL39_07340
Possible TonB-dependent receptor (795 aa)
              0.627
PBAL39_17439
FAD/FMN-containing dehydrogenase (466 aa)
     
 
    0.553
PBAL39_21680
Uncharacterized protein (151 aa)
 
          0.481
PBAL39_07360
Putative RNA polymerase sigma factor (191 aa)
              0.461
PBAL39_07335
Uncharacterized protein (67 aa)
              0.454
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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