STRINGSTRING
PBAL39_07355 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_07355" - Beta-lactamase in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_07355Beta-lactamase (364 aa)    
Predicted Functional Partners:
PBAL39_14189
Putative beta-lactamase (490 aa)
   
          0.744
PBAL39_17359
Beta-lactamase (550 aa)
   
          0.712
PBAL39_02890
Beta-lactamase (372 aa)
   
          0.707
PBAL39_07350
Uncharacterized protein (142 aa)
              0.657
PBAL39_07360
Putative RNA polymerase sigma factor (191 aa)
              0.586
PBAL39_22932
Serine-type D-Ala-D-Ala carboxypeptidase (334 aa)
   
          0.584
PBAL39_10401
PbpE (405 aa)
   
          0.569
PBAL39_09106
Putative iron transport/utilisation related protein (242 aa)
   
          0.544
PBAL39_07345
Uncharacterized protein (79 aa)
              0.490
PBAL39_07340
Possible TonB-dependent receptor (795 aa)
              0.490
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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