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PBAL39_07380 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_07380" - Alkaline phosphatase in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_07380Alkaline phosphatase (614 aa)    
Predicted Functional Partners:
PBAL39_07375
Putative outer membrane protein (525 aa)
 
          0.949
PBAL39_07370
Putative outer membrane protein (1101 aa)
 
          0.838
PBAL39_17444
Dihydroneopterin aldolase (124 aa)
     
 
    0.824
PBAL39_16771
Alkaline phosphatase, putative (468 aa)
   
   
 
0.811
rplQ
50S ribosomal protein L17 (179 aa)
       
      0.807
rpmA
50S ribosomal protein L27 (139 aa)
       
      0.796
ftsY
Signal recognition particle receptor FtsY ; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) (320 aa)
       
 
  0.764
rplW
50S ribosomal protein L23 ; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome (96 aa)
       
      0.687
rplR
50S ribosomal protein L18 ; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance (117 aa)
       
      0.687
rplK
50S ribosomal protein L11 ; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors (147 aa)
       
      0.687
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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