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PBAL39_07395 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_07395" - SEC-independent protein translocase protein TATC in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_07395SEC-independent protein translocase protein TATC (130 aa)    
Predicted Functional Partners:
PBAL39_07390
Uncharacterized protein (217 aa)
              0.602
PBAL39_07400
Uncharacterized protein (114 aa)
              0.544
PBAL39_24920
Iron-sulfur cluster assembly scaffold protein IscU ; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters (137 aa)
       
    0.424
PBAL39_07385
Alpha-1,2-mannosidase (764 aa)
              0.415
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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