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EDM35498.1 protein (Pedobacter sp. BAL39) - STRING interaction network
"EDM35498.1" - COG0642 Signal transduction histidine kinase in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM35498.1COG0642 Signal transduction histidine kinase (407 aa)    
Predicted Functional Partners:
EDM35499.1
COG2172 Anti-sigma regulatory factor (Ser/Thr protein kinase) (335 aa)
     
 
  0.871
EDM35500.1
COG2172 Anti-sigma regulatory factor (Ser/Thr protein kinase) (137 aa)
              0.855
EDM35501.1
Possible negative regulator of sigma-B; COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) (125 aa)
              0.854
EDM38264.1
COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain (121 aa)
 
 
      0.790
EDM36395.1
COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain (120 aa)
   
 
      0.777
EDM37803.1
Response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain; COG0784 FOG- CheY-like receiver (119 aa)
 
 
      0.767
EDM37532.1
Response regulator; COG0784 FOG- CheY-like receiver (130 aa)
 
 
      0.766
EDM35502.1
Positive regulator of sigma-B; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) (313 aa)
              0.763
EDM35996.1
Two component transcriptional regulator, winged helix family protein; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain (234 aa)
 
 
      0.745
EDM36270.1
Two-component system sensor histidine kinase/response regulator, hybrid (’one-component system’); COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain (253 aa)
 
 
      0.744
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter sp. BAL39
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