STRINGSTRING
PBAL39_07480 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_07480" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_07480Uncharacterized protein (197 aa)    
Predicted Functional Partners:
PBAL39_10276
Putative outer membrane protein (1227 aa)
   
          0.702
PBAL39_22580
Putative lipoprotein (497 aa)
   
          0.683
PBAL39_18644
Uncharacterized protein (487 aa)
   
          0.677
PBAL39_01297
Putative dehalogenase-hydrolase (231 aa)
   
          0.663
PBAL39_07475
Uncharacterized protein (600 aa)
              0.655
PBAL39_18639
Putative outer membrane protein (1197 aa)
   
          0.643
PBAL39_22585
Putative outer membrane protein (1198 aa)
   
          0.601
PBAL39_16519
Putative outer membrane protein (928 aa)
   
          0.588
PBAL39_04323
Uncharacterized protein (1168 aa)
   
          0.586
PBAL39_14814
Putative outer membrane protein (985 aa)
   
          0.585
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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