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PBAL39_07535 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_07535" - Probable periplasmic binding protein possible mechanosensitive ion channel component in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
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Textmining
[Homology]
Score
PBAL39_07535Probable periplasmic binding protein possible mechanosensitive ion channel component (778 aa)    
Predicted Functional Partners:
PBAL39_04668
Uncharacterized protein (151 aa)
   
          0.667
PBAL39_05818
Uncharacterized protein (137 aa)
   
          0.654
infB
Translation initiation factor IF-2 ; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex (1013 aa)
       
      0.631
PBAL39_22882
Putative outer membrane protein (511 aa)
   
          0.620
PBAL39_19325
RNA polymerase, sigma-E factor heat shock and oxidative stress (152 aa)
   
          0.617
PBAL39_11522
tRNA-dihydrouridine synthase ; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines (335 aa)
       
      0.604
PBAL39_01737
Uncharacterized protein (154 aa)
   
          0.556
PBAL39_07530
Uncharacterized protein (201 aa)
              0.554
PBAL39_17754
Outer membrane protein (449 aa)
   
 
      0.545
PBAL39_11377
Penicillin-binding protein (723 aa)
   
 
      0.487
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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