STRINGSTRING
PBAL39_07620 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_07620" - Putative outer membrane protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_07620Putative outer membrane protein (1126 aa)    
Predicted Functional Partners:
PBAL39_07615
Uncharacterized protein (470 aa)
 
          0.955
PBAL39_07610
Uncharacterized protein (270 aa)
              0.786
PBAL39_00717
Uncharacterized protein (478 aa)
 
          0.782
PBAL39_07585
ABC transporter, permease protein, putative (770 aa)
 
          0.782
PBAL39_22100
Uncharacterized protein (469 aa)
   
          0.778
PBAL39_13140
Uncharacterized protein (504 aa)
   
          0.778
PBAL39_00180
Uncharacterized protein (477 aa)
   
          0.778
PBAL39_16636
Putative outer membrane protein (486 aa)
   
          0.775
PBAL39_05853
Putative outer membrane protein (513 aa)
   
          0.775
PBAL39_03549
Putative outer membrane protein (468 aa)
   
          0.774
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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