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PBAL39_07750 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_07750" - Outer membrane receptor ragA protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_07750Outer membrane receptor ragA protein (1020 aa)    
Predicted Functional Partners:
PBAL39_07745
Uncharacterized protein (244 aa)
 
          0.967
PBAL39_07740
Uncharacterized protein (235 aa)
 
          0.967
PBAL39_07735
Sulfite oxidase cytochrome subunit (193 aa)
 
          0.900
PBAL39_07760
Uncharacterized protein (525 aa)
 
          0.856
PBAL39_07765
Uncharacterized protein (456 aa)
 
          0.855
PBAL39_15104
Putative outer membrane protein (453 aa)
   
          0.771
PBAL39_07990
Putative outer membrane protein (474 aa)
   
          0.769
PBAL39_00612
Putative outer membrane protein (489 aa)
   
          0.768
PBAL39_07730
Sulfite dehydrogenase (439 aa)
 
          0.762
PBAL39_18959
Putative outer membrane protein (522 aa)
   
          0.762
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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