STRINGSTRING
PBAL39_07790 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_07790" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_07790Uncharacterized protein (418 aa)    
Predicted Functional Partners:
PBAL39_07795
TonB-linked outer membrane receptor P92 (301 aa)
 
          0.947
PBAL39_07785
Uncharacterized protein (448 aa)
 
          0.850
PBAL39_20094
Putative TonB-dependent outer membrane protein (754 aa)
 
          0.844
PBAL39_14004
TonB-linked outer membrane receptor (794 aa)
 
          0.843
PBAL39_01282
Uncharacterized protein (355 aa)
   
          0.732
PBAL39_04573
Conserved protein found in conjugate transposon (213 aa)
   
          0.686
PBAL39_01262
Uncharacterized protein (578 aa)
   
          0.666
PBAL39_04583
Conjugative transposon protein TraI (220 aa)
   
          0.661
PBAL39_05393
Putative outer membrane protein (503 aa)
   
          0.650
PBAL39_07715
Putative secreted protein (543 aa)
   
          0.609
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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