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prpD protein (Pedobacter sp. BAL39) - STRING interaction network
"prpD" - 2-methylcitrate dehydratase in Pedobacter sp. BAL39
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prpD2-methylcitrate dehydratase (483 aa)    
Predicted Functional Partners:
PBAL39_07820
Citrate synthase (384 aa)
 
  0.983
PBAL39_07815
(2R,3S)-2-methylisocitrate lyase ; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate (299 aa)
 
 
  0.979
PBAL39_01607
Citrate synthase (428 aa)
   
  0.894
PBAL39_08180
Aconitate hydratase (758 aa)
   
 
  0.678
mdh
Malate dehydrogenase ; Catalyzes the reversible oxidation of malate to oxaloacetate (312 aa)
       
  0.543
PBAL39_04833
Malic enzyme (767 aa)
       
  0.480
PBAL39_23817
Acetyl-coenzyme A synthetase (630 aa)
   
   
  0.439
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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