STRINGSTRING
PBAL39_07840 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_07840" - Metallo-beta-lactamase superfamily protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_07840Metallo-beta-lactamase superfamily protein (263 aa)    
Predicted Functional Partners:
PBAL39_20685
DNA polymerase IV, family X (542 aa)
     
      0.975
PBAL39_07835
Fe-S oxidoreductase, possible dehydrogenase subunit (266 aa)
              0.859
PBAL39_07830
Possible oxidoreductase, Fe-S subunit (431 aa)
              0.752
PBAL39_01887
UDP-glucose/GDP-mannose dehydrogenase family protein (430 aa)
     
      0.537
lipA
Sulfur insertion protein LipA ; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives (240 aa)
     
 
    0.517
rnz
tRNase Z ; Zinc phosphodiesterase, which displays some tRNA 3’- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3’-trailer from precursor tRNA (303 aa)
     
 
  0.514
rlmH
rRNA (pseudouridine-N3-)-methyltransferase RlmH ; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA (157 aa)
 
   
  0.509
PBAL39_03449
Two-component sensor histidine kinase (584 aa)
 
     
  0.506
PBAL39_19320
Protease Do (363 aa)
 
   
  0.497
PBAL39_05363
Putative udp-glucose 6-dehydrogenase (438 aa)
     
      0.482
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
Server load: low (7%) [HD]