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PBAL39_07930 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_07930" - Isocitrate dehydrogenase [NADP] in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_07930Isocitrate dehydrogenase [NADP] (411 aa)    
Predicted Functional Partners:
PBAL39_08180
Aconitate hydratase (758 aa)
   
  0.929
kgd
Alpha-ketoglutarate decarboxylase (931 aa)
     
 
  0.914
PBAL39_02102
Glutamate synthase, large subunit (1182 aa)
   
 
  0.909
PBAL39_21560
Glutamate dehydrogenase (473 aa)
     
  0.879
PBAL39_18299
Putative aspartate aminotransferase (397 aa)
     
 
  0.857
PBAL39_14484
Aspartate aminotransferase (400 aa)
     
 
  0.857
PBAL39_17539
Succinate-semialdehyde dehydrogenase (457 aa)
   
 
  0.848
PBAL39_19684
Dihydrolipoyl dehydrogenase (462 aa)
     
 
  0.844
PBAL39_04179
Dihydrolipoyl dehydrogenase (481 aa)
     
 
  0.844
PBAL39_19330
Adenylosuccinase (448 aa)
   
 
    0.838
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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