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PBAL39_07940 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_07940" - Probable tonB-dependent receptor in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_07940Probable tonB-dependent receptor (608 aa)    
Predicted Functional Partners:
PBAL39_07935
Uncharacterized protein (116 aa)
              0.665
PBAL39_20725
ABC-type Fe3+-siderophores transport system (264 aa)
   
 
  0.637
PBAL39_06216
Putative transport related membrane protein (236 aa)
   
 
  0.622
PBAL39_05783
Biopolymer transport protein (275 aa)
   
 
  0.622
PBAL39_18174
Permease protein of ABC transporter (348 aa)
   
 
  0.586
PBAL39_07785
Uncharacterized protein (448 aa)
 
        0.578
PBAL39_22015
Uncharacterized protein (142 aa)
   
          0.576
PBAL39_16651
Uncharacterized protein (449 aa)
 
        0.575
PBAL39_17454
Uncharacterized protein (133 aa)
   
          0.563
PBAL39_04663
Methylenetetrahydrofolate reductase (318 aa)
   
      0.514
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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